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269020 VO Computational Concepts in Biology II (2014S)

3.00 ECTS (2.00 SWS), SPL 26 - Physik

The lecture will mainly consist of lab visits. These visits will consist of short lectures, seminars, practical exercises, presentations and group discussions (according to the topics to be covered).
The schedule will be arranged with the participating students at the first date of the lecture (Wed Mar 5, 16.00, Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk.). Presence in the first lecture is therefore mandatory for further participation in the lecture.
Moodle

Details

Sprache: Englisch

Prüfungstermine

Lehrende

Termine (iCal) - nächster Termin ist mit N markiert

  • Mittwoch 05.03. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 19.03. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 26.03. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 02.04. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 09.04. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 30.04. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 07.05. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 14.05. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 21.05. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 28.05. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 04.06. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 18.06. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien
  • Mittwoch 25.06. 16:00 - 18:00 Seminarraum, Zi. 3354A, Boltzmanngasse 5, 3. Stk., 1090 Wien

Information

Ziele, Inhalte und Methode der Lehrveranstaltung

Functional genomics
- Large-scale experimental methods
- Data management, reduction, normalization
- Methods for differential analysis and clustering
- Enrichment analysis and network-based analysis

Biological networks
- Topological analysis
- Stoichiometric analysis (MFA, FBA)
- Rule-based modeling of combinatorial complex networks
- Differential equation based methods
- Process algebras and model-checking

Organisms and ecosystems
- Genetics and metabolomics
- Systems biology of human diseases
- Dynamical modeling of organism development (including imaging)
- Environmental modeling (ecoenzymatic theories, stochiometry based theories)
- Information processing in biological systems

Art der Leistungskontrolle und erlaubte Hilfsmittel

Written exam

Mindestanforderungen und Beurteilungsmaßstab

Ability to explain the biological problem; ability to abstract the biological problem and to connect it to computational concepts; ability to select appropriate mathematical and computational methods; ability to perform selected computational methods and to interprete their results.

Prüfungsstoff

Lectures, seminars, practical exercises, presentations and group discussions.

Literatur

Will be provided during the lecture

Zuordnung im Vorlesungsverzeichnis

CO-BIO2

Letzte Änderung: Sa 08.07.2023 00:21