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300347 UE Phylogeny of prokaryotes (2011S)

(1h lecture and 2 parallel 2h laboratory course)

Continuous assessment of course work

Termin: 11.-15.Juli 2011, jeweils ab 9 Uhr im Seminarraum Ökologie

Ort: Seminarraum Ökologie und EDV-Raum 2, UZA 1, Althanstr 14

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).

Registration is open from Mo 07.02.2011 08:00 to Tu 22.02.2011 20:00
Deregistration possible until We 30.03.2011 20:00

Details

max. 20 participants

Language: German

Lecturers

Classes (iCal) - next class is marked with N

Monday 11.07. 09:00 - 18:00 Schreibraum/Seminarraum
Tuesday 12.07. 09:00 - 18:00 Schreibraum/Seminarraum
Wednesday 13.07. 09:00 - 18:00 Schreibraum/Seminarraum
Thursday 14.07. 09:00 - 18:00 Schreibraum/Seminarraum
Friday 15.07. 09:00 - 18:00 Schreibraum/Seminarraum

Information

Aims, contents and method of the course

This course provides an overview of the classification and taxonomy of prokaryotes, and introduces basic concepts of molecular taxonomy, phylogenetic sequence analysis, and phylogenetic treeing methods. This knowledge is applied in practical exercises with online databases, web-based tools for sequence analysis and the phylogeny software package ARB. The programme ARB is a comprehensive, worldwide-used software environment for comparative sequence analysis and phylogenetic inference.

Assessment and permitted materials

Continuous assessment of course work. Cooperation and achieved results during the course, written exam.

Minimum requirements and assessment criteria

Participants will learn how to interpret phylogenetic data and identify microorganisms by means of phylogenetic marker genes.

Examination topics

Import of sequence data from public databases, application of phylogeny software (sequence alignment, treeing calculations), methods to analyze the diversity of natural microbial communities based on phylogenetic data.

Reading list

Association in the course directory

MOE III-1, MEV W-1

Last modified: Sa 22.10.2022 00:30